CONFIG_SOC_SAMA5D3 is not available for thedefaultarchitecture x86.
Result is shown for architecture arm

SAMA5D3 family

modulename: sama5d3.ko

and/or

configname: CONFIG_SOC_SAMA5D3

Linux Kernel Configuration
└─>Atmel AT91 System-on-Chip
└─>SAMA5D3 family
In linux kernel since version 3.1 (release Date: 2011-10-24)  
Select this if you are using one of Atmel's SAMA5D3 family SoC.
This support covers SAMA5D31, SAMA5D33, SAMA5D34, SAMA5D35.

source code:
arch/arm/mach-at91/sama5d3.c